Publications (google scholar)

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Convergent reduction in skeletal density during benthic to pelagic transitions in Baikal sculpins

Gutierrez BA, Larouche O, Loetzerich S, Gerringer ME, Evans KM, Aguilar A, Kirilchik S, Sandel MW, Daane JM. 2025. bioRxiv doi:10.64898/2026.01.22.701097.

Establishment, conservation, and innovation of dorsal determination mechanisms during the evolution of vertebrate paired appendages

Hawkins MB, Zdral S, Naranjo S, Julia M, Sanchez-Martin M, Daane JM, Cumplido N, Jandzik D, Medeiros DM, McMenamin S, Harris MP, Tena JJ, Ros M. 2025. bioRxiv doi:10.1101/2025.07.02.662459.

Projected warming disrupts embryonic development and hatch timing in Antarctic fish

Streeter M, Le Francois NR, Desvignes T, Grondin J, Postlethwait JH, Detrich HW III, Daane JM. 2025. bioRxiv doi:10.1101/2025.05.28.656708.

Convergent latitudinal erosion of circadian systems in a rapidly diversifying order of fishes

Wright DB , Zhang Y, Daane JM. 2024. bioRxiv doi:10.1101/2025.05.28.656707.

Phylogenomic analysis of the Lake Kronotskoe species flock of Dolly Varden charr reveals genetic and developmental signatures of sympatric radiation

Woronowicz KC, Esin EV, Markevich GN, Martinez CS, McMenamin SK, Daane JM, Harris MP, Shkil FN. 2024. Development 151:dev203002.

Multiple Ecological Axes Drive Molecular Evolution of Cone Opsins in Beloniform Fishes

Chau KD, Hauser FE, Nynatten AV, Daane JM, Harris MP, Chang BSW, Lovejoy NR. 2024. Journal of Molecular Evolution 92:93–103.

Convergent genomics of longevity in rockfishes highlights the genetics of human life span variation

Treaster S, Deelen J, Daane JM, Murabito J, Karasik D, Harris MP. 2023. Science Advances 9:eadd27.

Speciation genomics and the role of depth in the divergence of rockfishes (Sebastes) revealed through Pool-seq analysis of enriched sequences

Olivares-Zambrano D, Daane JM, Hyde J, Sandel MW, Aguilar A. 2022. Ecology and Evolution 12(9):e9341.

Adaptations and Diversity of Antarctic Fishes- A Genomic Perspective

Daane JM, Detrich HW III. 2022. Annual Review of Animal Biosciences 10:39-62.

Modulation of bioelectric cues in the evolution of flying fishes

Daane JM, Blum N, Lanni J, Boldt H, Iovine KM, Higdon CW, Johnson SL, Lovejoy NR, Harris MP. 2021. Current Biology 31(22):5052-5061.e8

Refining Convergent Rate Analysis with Topology in Mammalian Longevity and Marine Transitions

Treaster S, Daane JM, Harris MP. 2021. Molecular Biology and Evolution msab226

Developmental constraint shaped genome evolution and erythrocyte loss in Antarctic fishes following paleoclimate change

Daane JM, Auvinet J, Stoebenau A, Yergeau D, Harris MP and Detrich HW III. 2020. PLoS Genetics 16(10):e1009173

Veiled mirrors - fish fins giving insight into size regulation

Harris MP, Daane JM, Lanni J. 2020. Wiley Interdisciplinary Reviews Developmental Biology 10(4):e381

Adaptations to environmental change - Globin superfamily evolution in Antarctic fishes

Daane JM, Giordano D, Coppola D, di Prisco G, Detrich HW III, Verde C. 2020. Marine Genomics 49:100724

celsr1a is essential for tissue homeostasis and onset of aging phenotypes in the zebrafish

Li C, Barton C, Henke K, Daane JM, Caetano-Lopes J, Tanguay R, Harris MP. 2020. eLife 9:e50523

Historical contingency shapes adaptive radiation in Antarctic fishes

Daane JM, Dornburg A, Smits P, MacGuigan D, Hawkins B, Near TJ, Harris MP*, Detrich HW III*. 2019. Nature Ecology & Evolution 3(7):1102-1109

Bioelectric-calcineurin signaling module regulates allometric growth and size of the zebrafish fin

Daane JM, Lanni J, Rothenberg I, Seebohm G, Higdon CW, Johnson SL and Harris MP. 2018. Scientific Reports 8(1):10391

Genetic Screen for Postembryonic Development in the Zebrafish (Danio rerio)- Dominant Mutations Affecting Adult Form

Henke K, Daane JM, Hawkins MB, Dooley CM, Busch-Nentwich EM, Stemple DL, Harris MP. 2017. Genetics 207(2):609-623

Parallelism and Epistasis in Skeletal Evolution Identified through Use of Phylogenomic Mapping Strategies

Daane JM, Rohner N, Konstantinidis P, Djuranovic S, Harris MP. 2016. Mol Biol Evol 33(1):162-73

Bioelectric signaling regulates size in zebrafish fins

Perathoner S, Daane JM, Henrion U, Seebohm G, Lanni SL, Higdon CW, Johnson SL, Nüsslein-Volhard C, Harris MP. 2014. PLoS Genetics 10(1):e1004080

Hedgehog signaling in the posterior region of the mouse gastrula suggests manifold roles in the fetal-umbilical connection and posterior morphogenesis

Daane JM and Downs KM. 2011. Dev Dyn 240(9):2175-93

Mesothelium of the murine allantois exhibits distinct regional properties

Daane JM, Enders AC, Downs KM. 2011. J Morphol 272(5):536-56